bubble-dynamics, branch HEAD

Add README file

2024-07-26T13:38:16Z

commit 0ecedb01c3431dab66129fd9eca95b43d69d92f5 parent d2597a14f2132d52ef0b2ecb555e6c9cf35eb37d Author: Fabian Wermelinger Date: Fri, 26 Jul 2024 15:38:16 +0200 Add README file

More aggressive subprojects .gitignore

2021-07-10T23:39:25Z

commit d2597a14f2132d52ef0b2ecb555e6c9cf35eb37d parent 3d021bff06158675b389ebac1756864f5d94d9df Author: Fabian Wermelinger Date: Sun, 11 Jul 2021 01:39:25 +0200 More aggressive subprojects .gitignore

Replace git submodule with meson wrap

2021-07-10T23:36:33Z

commit 3d021bff06158675b389ebac1756864f5d94d9df parent a57f94d91dbad65f63fbb261ac38a13b61242e07 Author: Fabian Wermelinger Date: Sun, 11 Jul 2021 01:36:33 +0200 Replace git submodule with meson wrap

Add MIT license

2021-07-10T23:27:07Z

commit a57f94d91dbad65f63fbb261ac38a13b61242e07 parent 8df524b75a04daaa854d6a43b1101c787317a71c Author: Fabian Wermelinger Date: Sun, 11 Jul 2021 01:27:07 +0200 Add MIT license

Revert "starting with learnedBubbleDynamics in python"

2021-02-09T18:02:40Z

commit 8df524b75a04daaa854d6a43b1101c787317a71c parent aa2b37100755234f1623e1ee731aeefbe5e82f42 Author: Fabian Wermelinger Date: Tue, 9 Feb 2021 19:02:40 +0100 Revert "starting with learnedBubbleDynamics in python" This reverts commit aa2b37100755234f1623e1ee731aeefbe5e82f42.

starting with learnedBubbleDynamics in python

2021-02-09T13:14:48Z

commit aa2b37100755234f1623e1ee731aeefbe5e82f42 parent 422837ab2f55b7b23bc24297964b5201e17a1815 Author: pvlachas Date: Tue, 9 Feb 2021 14:14:48 +0100 starting with learnedBubbleDynamics in python

Add missing openmp dependency

2021-01-31T23:42:47Z

commit 422837ab2f55b7b23bc24297964b5201e17a1815 parent a3b718f28f69cefd6ab3740f58c847a7fcdb26c2 Author: Fabian Wermelinger Date: Mon, 1 Feb 2021 00:42:47 +0100 Add missing openmp dependency

Update subprojects

2021-01-31T23:42:33Z

commit a3b718f28f69cefd6ab3740f58c847a7fcdb26c2 parent 805a918eaaf881d65b08a5bb44dba027f7ea1b08 Author: Fabian Wermelinger Date: Mon, 1 Feb 2021 00:42:33 +0100 Update subprojects

Fix include directories

2021-01-31T23:42:15Z

commit 805a918eaaf881d65b08a5bb44dba027f7ea1b08 parent ae07d60f94d7505e8bbd652e49daa01423ff1a1d Author: Fabian Wermelinger Date: Mon, 1 Feb 2021 00:42:15 +0100 Fix include directories

Make ode_toolbox a runtime dependency

2021-01-28T17:53:04Z

commit ae07d60f94d7505e8bbd652e49daa01423ff1a1d parent 5c77af64c26d91630cacb43602e90f3282588bfb Author: Fabian Wermelinger Date: Thu, 28 Jan 2021 18:53:04 +0100 Make ode_toolbox a runtime dependency

Use eigen 3.3.7 wrap (3.3.8 is broken)

2020-12-19T23:15:56Z

commit 5c77af64c26d91630cacb43602e90f3282588bfb parent 3ed4d1fa2e7f6f1c0f4f9d890427a8df53f89106 Author: Fabian Wermelinger Date: Sun, 20 Dec 2020 00:15:56 +0100 Use eigen 3.3.7 wrap (3.3.8 is broken)

Update eigen wrap

2020-12-19T22:59:56Z

commit 3ed4d1fa2e7f6f1c0f4f9d890427a8df53f89106 parent 12a0ae566f7bb71ba8029c5551cc1daa56183f0f Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 23:59:56 +0100 Update eigen wrap

Install binary to $HOME/.local

2020-12-19T22:32:48Z

commit 12a0ae566f7bb71ba8029c5551cc1daa56183f0f parent d6cbc0743dea18ee64a56180a8150560ed138d38 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 23:32:48 +0100 Install binary to $HOME/.local

Remove _POS_STATE_ dependencies

2020-12-19T22:13:18Z

commit d6cbc0743dea18ee64a56180a8150560ed138d38 parent f9f501b7c18e3b190677bc5b961b225bb074f588 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 23:13:18 +0100 Remove _POS_STATE_ dependencies

Add more precompiled headers

2020-12-19T22:13:04Z

commit f9f501b7c18e3b190677bc5b961b225bb074f588 parent 197b13ee028f02cbfd7b3049ccd8c4f3371d5ba3 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 23:13:04 +0100 Add more precompiled headers

Update subprojects

2020-12-19T22:12:32Z

commit 197b13ee028f02cbfd7b3049ccd8c4f3371d5ba3 parent 784959b93d9e9e52533ed4d572e3a852d1a98956 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 23:12:32 +0100 Update subprojects

Remove option file

2020-12-19T22:12:18Z

commit 784959b93d9e9e52533ed4d572e3a852d1a98956 parent f60b10bfd9befef7a39235a77ed59b21685d7e91 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 23:12:18 +0100 Remove option file

FIx constant amplification factor due to (p0 + pext) implementation

2020-12-19T19:56:06Z

commit f60b10bfd9befef7a39235a77ed59b21685d7e91 parent 01791599831bb010247a4e57db56e3f02517d196 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 20:56:06 +0100 FIx constant amplification factor due to (p0 + pext) implementation

Add build script

2020-12-19T19:49:36Z

commit 01791599831bb010247a4e57db56e3f02517d196 parent cb4ff1cdb5e3eb384d8bdbdc2f3a592fbdacdbc9 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 20:49:36 +0100 Add build script

Update subprojects

2020-12-19T19:45:51Z

commit cb4ff1cdb5e3eb384d8bdbdc2f3a592fbdacdbc9 parent 7f125c55a75ac0cedf6baf6a3af24d2189fcff1e Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 20:45:51 +0100 Update subprojects

Add Keller-Miksis test

2020-12-19T19:45:24Z

commit 7f125c55a75ac0cedf6baf6a3af24d2189fcff1e parent e7499e1d066d4d354568162f3b0648483c89a798 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 20:45:24 +0100 Add Keller-Miksis test

Add precompiled header

2020-12-19T19:45:04Z

commit e7499e1d066d4d354568162f3b0648483c89a798 parent 1f04f60bd613409cf4c363ce25260a634a68de42 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 20:45:04 +0100 Add precompiled header

Add few more ignores

2020-12-19T17:12:50Z

commit 1f04f60bd613409cf4c363ce25260a634a68de42 parent f041c6d2e0a54f4ffcd9f2d26d1d48c959de403d Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 18:12:50 +0100 Add few more ignores

Fix warnings

2020-12-19T17:12:21Z

commit f041c6d2e0a54f4ffcd9f2d26d1d48c959de403d parent e1a4f02bfedf3f5ab57e06318a789d03546937ca Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 18:12:21 +0100 Fix warnings

Add meson build files

2020-12-19T17:12:07Z

commit e1a4f02bfedf3f5ab57e06318a789d03546937ca parent 3b2ccbbab9d8323b0b26d148298ccc8c81de841d Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 18:12:07 +0100 Add meson build files

Add eigen3 dependency

2020-12-19T17:11:50Z

commit 3b2ccbbab9d8323b0b26d148298ccc8c81de841d parent db054243838f658dea444346224b3c1fe349a04b Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 18:11:50 +0100 Add eigen3 dependency

Move dependency to subprojects/

2020-12-19T17:10:20Z

commit db054243838f658dea444346224b3c1fe349a04b parent 9a113e6ab9de17da0749e467bfd429c486eb6ac5 Author: Fabian Wermelinger Date: Sat, 19 Dec 2020 18:10:20 +0100 Move dependency to subprojects/

add RP example with step

2019-03-22T13:06:18Z

commit 9a113e6ab9de17da0749e467bfd429c486eb6ac5 parent ff73e8e621f46ac62c400cb741c50b3067d29af0 Author: Fabian Wermelinger Date: Fri, 22 Mar 2019 14:06:18 +0100 add RP example with step

no need for path in make.wrapper.sh

2017-06-24T01:20:21Z

commit ff73e8e621f46ac62c400cb741c50b3067d29af0 parent 5ad5427a87bef043bacf9de7577a95e52f73b49e Author: Fabian Wermelinger Date: Fri, 23 Jun 2017 18:20:21 -0700 no need for path in make.wrapper.sh

minor

2017-06-12T18:38:41Z

commit 5ad5427a87bef043bacf9de7577a95e52f73b49e parent 9a1712de64378600332bfc1f5ed3b7543a686c61 Author: Fabian Wermelinger Date: Mon, 12 Jun 2017 11:38:41 -0700 minor

updated vector type to use LightVector's

2017-06-11T19:23:54Z

commit 9a1712de64378600332bfc1f5ed3b7543a686c61 parent 785d029a44b8db5f6f13359d7bbd4b0f82ac7bec Author: Fabian Wermelinger Date: Sun, 11 Jun 2017 12:23:54 -0700 updated vector type to use LightVector's

updated submodules

2017-06-10T09:02:24Z

commit 785d029a44b8db5f6f13359d7bbd4b0f82ac7bec parent abeed670d7f49bf2801ca628880a00082e1bb67c Author: Fabian Wermelinger Date: Sat, 10 Jun 2017 02:02:24 -0700 updated submodules

definition of states is problem dependent and belongs here

2017-06-10T08:55:11Z

commit abeed670d7f49bf2801ca628880a00082e1bb67c parent 7f7950775af57b0e1c49a40e81c5f7ecf0b2c997 Author: Fabian Wermelinger Date: Sat, 10 Jun 2017 01:55:11 -0700 definition of states is problem dependent and belongs here

make wrapper for compilation within vim

2017-06-10T00:10:05Z

commit 7f7950775af57b0e1c49a40e81c5f7ecf0b2c997 parent ad5f515d16442179b65474df548d82d0d594ba84 Author: Fabian Wermelinger Date: Fri, 9 Jun 2017 17:10:05 -0700 make wrapper for compilation within vim

tidy-up KM based cases with correct bubble pressures and dpext issue

2017-06-10T00:09:24Z

commit ad5f515d16442179b65474df548d82d0d594ba84 parent 58431e995aa4ea27b52bf1a0258d11f077310ba7 Author: Fabian Wermelinger Date: Fri, 9 Jun 2017 17:09:24 -0700 tidy-up KM based cases with correct bubble pressures and dpext issue corrected coefficients in all cases for the forcing pressure derivative term. Tidy-up individual terms

added Gaussian and sinusoidal pulse forcing

2017-06-10T00:07:44Z

commit 58431e995aa4ea27b52bf1a0258d11f077310ba7 parent 411bf7e617fbb5c7ccf46eb363362996db576f86 Author: Fabian Wermelinger Date: Fri, 9 Jun 2017 17:07:44 -0700 added Gaussian and sinusoidal pulse forcing

added two new test cases to example section

2017-06-10T00:06:14Z

commit 411bf7e617fbb5c7ccf46eb363362996db576f86 parent a261da202d7b417262f1e24b3630895536ef1d7f Author: Fabian Wermelinger Date: Fri, 9 Jun 2017 17:06:14 -0700 added two new test cases to example section

added simple Rayleigh-Plesset example

2017-06-08T06:52:51Z

commit a261da202d7b417262f1e24b3630895536ef1d7f parent eb18f906d66a8f3bc1ba4ed319068ac5902f301a Author: Fabian Wermelinger Date: Wed, 7 Jun 2017 23:52:51 -0700 added simple Rayleigh-Plesset example

added another ignore

2017-06-08T06:16:49Z

commit eb18f906d66a8f3bc1ba4ed319068ac5902f301a parent bdbf529d6fd941c1cb24a030ded208bc43f73c9a Author: Fabian Wermelinger Date: Wed, 7 Jun 2017 23:16:49 -0700 added another ignore

Integrated serializer for restarts

2017-02-21T16:45:11Z

commit bdbf529d6fd941c1cb24a030ded208bc43f73c9a parent d8fbc4a5754fbdae871da60c87a734eb662b7d02 Author: Fabian Wermelinger Date: Tue, 21 Feb 2017 17:45:11 +0100 Integrated serializer for restarts To create restart snapshots use: -ts_restart_step To restart from the last available snapshot: -ts_restart Note that currently data is _appended_ to the existing result file.

added comments

2017-02-20T14:06:18Z

commit d8fbc4a5754fbdae871da60c87a734eb662b7d02 parent 0ad2649d61478ea0c045b2df3888c402a51705b7 Author: Ursula Rasthofer Date: Mon, 20 Feb 2017 15:06:18 +0100 added comments

updated ode_toolbox for consideration of bubble translation

2017-02-07T11:34:08Z

commit 0ad2649d61478ea0c045b2df3888c402a51705b7 parent 3b14e1736fe91a2fe0b2480ee40b0ca3a8bf2c53 Author: Ursula Rasthofer Date: Tue, 7 Feb 2017 12:34:08 +0100 updated ode_toolbox for consideration of bubble translation

KM cluster with higher-order terms in 1/c according to Fuster & Colonius 2011

2017-02-07T11:20:31Z

commit 3b14e1736fe91a2fe0b2480ee40b0ca3a8bf2c53 parent 7aa18619aa9c531bfc74550d1dbe30c34c2b22e4 Author: Ursula Rasthofer Date: Tue, 7 Feb 2017 12:20:31 +0100 KM cluster with higher-order terms in 1/c according to Fuster & Colonius 2011

bubble cluster with particle translation according to Doinikov 2004 KM and RP version

2017-02-07T10:32:11Z

commit 7aa18619aa9c531bfc74550d1dbe30c34c2b22e4 parent 0e97bc9c31d39275196935a69d44fcd9029cbb35 Author: Ursula Rasthofer Date: Tue, 7 Feb 2017 11:32:11 +0100 bubble cluster with particle translation according to Doinikov 2004 KM and RP version some minor clean-up of the code will follow

added RP-cluster

2017-02-06T17:55:54Z

commit 0e97bc9c31d39275196935a69d44fcd9029cbb35 parent a44793fa3b64c460c2cb675919424df4e888932b Author: Ursula Rasthofer Date: Mon, 6 Feb 2017 18:55:54 +0100 added RP-cluster

generalized output for clouds such that all bubbles are written

2017-02-03T18:12:13Z

commit a44793fa3b64c460c2cb675919424df4e888932b parent d5cd12233e9f3fe0497e3122a592816312dc9e9a Author: Ursula Anna Rasthofer Date: Fri, 3 Feb 2017 19:12:13 +0100 generalized output for clouds such that all bubbles are written

changed linear solver for clouds from fullPivHouseholderQr() to colPivHouseholderQr()

2017-02-03T18:08:11Z

commit d5cd12233e9f3fe0497e3122a592816312dc9e9a parent 568c00aa72a9cef6a69769409285fb88fcf922d4 Author: Ursula Anna Rasthofer Date: Fri, 3 Feb 2017 19:08:11 +0100 changed linear solver for clouds from fullPivHouseholderQr() to colPivHouseholderQr()

Bug fix in rhs term involving derivative of external presure

2017-01-25T16:07:18Z

commit 568c00aa72a9cef6a69769409285fb88fcf922d4 parent faf316b78264cb00f2bb24ce055851267c0e8191 Author: Fabian Wermelinger Date: Wed, 25 Jan 2017 17:07:18 +0100 Bug fix in rhs term involving derivative of external presure Credit to U. Rasthofer

updated submodule url

2016-10-03T16:28:17Z

commit faf316b78264cb00f2bb24ce055851267c0e8191 parent a5c76104814604c98cf2ee2365e2559d5f1273a2 Author: Fabian Wermelinger Date: Mon, 3 Oct 2016 18:28:17 +0200 updated submodule url

added default type argument for Trhs in kernels

2016-09-26T07:33:33Z

commit a5c76104814604c98cf2ee2365e2559d5f1273a2 parent 5786f0a370b9f225b9aaae33cba3313be8a64cb3 Author: Fabian Wermelinger Date: Mon, 26 Sep 2016 09:33:33 +0200 added default type argument for Trhs in kernels

updated submodules

2016-09-25T14:41:21Z

commit 5786f0a370b9f225b9aaae33cba3313be8a64cb3 parent 9d89293d196931f9a0d2eef8389bc8426557effe Author: Fabian Wermelinger Date: Sun, 25 Sep 2016 16:41:21 +0200 updated submodules fixed posix memalign issue (the fix does not affect this code base, however)

modified clean rule in Makefile

2016-09-25T13:11:19Z

commit 9d89293d196931f9a0d2eef8389bc8426557effe parent 2ba6ff46649c6486f6361f143e75512d11f40c1e Author: Fabian Wermelinger Date: Sun, 25 Sep 2016 15:11:19 +0200 modified clean rule in Makefile

updated submodules

2016-09-25T13:09:32Z

commit 2ba6ff46649c6486f6361f143e75512d11f40c1e parent 916dd777f665793e7f34186585cecc97256b3228 Author: Fabian Wermelinger Date: Sun, 25 Sep 2016 15:09:32 +0200 updated submodules

removed mixed precision time stepping and updated submodules

2016-09-25T11:46:44Z

commit 916dd777f665793e7f34186585cecc97256b3228 parent 5df28a3399491ce662c093e83e24eaf8aff2f714 Author: Fabian Wermelinger Date: Sun, 25 Sep 2016 13:46:44 +0200 removed mixed precision time stepping and updated submodules

added deepclean rule

2016-09-22T17:21:35Z

commit 5df28a3399491ce662c093e83e24eaf8aff2f714 parent 2a480865ce93cc8815b86c6033c96afba687a2a5 Author: Fabian Wermelinger Date: Thu, 22 Sep 2016 19:21:35 +0200 added deepclean rule

Merge branch 'master' of scratch-petros.ethz.ch:/export/home/gitroot/bubbleDynamics1D

2016-09-22T17:11:29Z

commit 2a480865ce93cc8815b86c6033c96afba687a2a5 parent a8e1406b55eed176756261420d7ef1a64391dc41 Author: Fabian Wermelinger Date: Thu, 22 Sep 2016 19:11:29 +0200 Merge branch 'master' of scratch-petros.ethz.ch:/export/home/gitroot/bubbleDynamics1D

minor adjustment in test cases

2016-09-22T17:11:11Z

commit a8e1406b55eed176756261420d7ef1a64391dc41 parent f739cc31b8e32ca9ab1e080ac01eb804c583dac0 Author: Fabian Wermelinger Date: Thu, 22 Sep 2016 19:11:11 +0200 minor adjustment in test cases

added README file in examples

2016-09-22T17:02:23Z

commit 9fa8ffd5025e6bf46f88f32315391a7406b29d07 parent f739cc31b8e32ca9ab1e080ac01eb804c583dac0 Author: Fabian Wermelinger Date: Thu, 22 Sep 2016 19:02:23 +0200 added README file in examples

initial

2016-09-22T16:41:05Z

commit f739cc31b8e32ca9ab1e080ac01eb804c583dac0 Author: Fabian Wermelinger Date: Thu, 22 Sep 2016 18:41:05 +0200 initial